47e76e0ba7
AMUN: Print problem information.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2021-11-17 09:27:20 -03:00
352b3c26f8
PROBLEM: Add module to handle the simulation related steps.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2021-11-17 09:19:23 -03:00
4c9ed6bbb5
DRIVER: Rename driver.F90 to amun.F90 and clean it up.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2021-11-16 22:39:30 -03:00
2e4f1fa48f
DRIVER: Rename driver.F90 to amun.F90.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2021-11-16 19:00:07 -03:00
59b89a96dd
OPERATORS: Move initialization/finalization to INTERPOLATIONS.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2021-11-16 17:55:02 -03:00
f659000e8c
PROFILE: Remove all custom profiling.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2021-11-16 15:22:15 -03:00
40f3e24631
MESH, PROBLEMS: Move procedure pointer to MESH.
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This inverts the dependencies allowing for initiating module MESH
from PROBLEMS.
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2021-11-16 14:02:25 -03:00
384e1ab3d6
EVOLUTION: Move initialization/finalization of SOURCES to EVOLUTION.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2021-11-16 13:08:37 -03:00
f3fd8aca1d
EVOLUTION: Move initialization/finalization of SHAPES to EVOLUTION.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2021-11-16 13:00:04 -03:00
1ae3975cd7
MESH: Move REFINEMENT initialization/finalization to MESH.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2021-11-16 12:42:38 -03:00
ea010e0ff3
IO: Pass the problem's name as argument to snapshots.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2021-11-16 12:31:10 -03:00
f9436dd9fb
BLOCKS: Remove profiling.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2021-11-16 12:16:26 -03:00
73be41df08
WORKSPACE: Pass the initial workspace size as argument.
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Also remove the profiling.
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2021-11-16 12:00:13 -03:00
f2e7e00d29
RANDOM: Pass the generator type as argument.
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Also remote the profiling.
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2021-11-16 11:52:43 -03:00
0c03c2d3bd
PARAMETERS: Remove dependency on HELPERS.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2021-11-16 11:36:26 -03:00
920535030e
DOMAINS, MESH: Merge module DOMAINS into MESH.
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Module DOMAINS provided only one subroutine to generate the block
structure of the rectangular base domain. This change just moved this
subroutine to module MESH.
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2021-11-16 11:13:42 -03:00
2ac66d3d37
FORCING: Reset work_in_use in inject_fmodes_block().
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2021-11-15 17:22:52 -03:00
d1e9884503
WORKSPACE: Make nwork private.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2021-11-15 11:31:36 -03:00
11559f1070
FORCING: Use resize_workspace() in inject_fmodes_block().
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2021-11-13 21:43:07 -03:00
7c08dc2229
INTEGRALS: Use resize_workspace() in store_integrals().
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2021-11-13 21:39:40 -03:00
1b1e3ab034
SOURCES: Use resize_workspace() in update_sources().
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2021-11-13 20:38:27 -03:00
43e32a755f
MESH: Use resize_workspace() in prolong_block().
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2021-11-13 20:35:37 -03:00
2f9db104d5
EVOLUTION: Use resize_workspace() in update_increment().
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2021-11-13 20:33:02 -03:00
5d3df2c71d
REFINEMENT: Use resize_workspace() in vorticity_magnitude().
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2021-11-13 20:29:08 -03:00
be02a97d11
REFINEMENT: Warn if workspace is used in current_density_magnitude().
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2021-11-13 20:26:34 -03:00
f346f9b3b3
REFINEMENT: Use resize_workspace() in current_density_magnitude().
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2021-11-13 19:46:08 -03:00
f6784d8861
WORKSPACE: Add subroutine to resize the workspace.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2021-11-13 19:44:06 -03:00
28de30a8d5
INTEGRALS: Use workspace for local arrays.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2021-11-12 23:01:23 -03:00
8ddb4a3681
REFINEMENT: Use workspace in vorticity & current density criterions.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2021-11-12 22:42:53 -03:00
a381fc0cce
MESH: Remove workspace from this module.
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Use everywhere the workspace provided by module WORKSPACE.
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2021-11-12 22:35:05 -03:00
79b137a355
WORKSPACE: Add module to handle workspace explicitely.
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Perform its initialization and finalization in the driver.
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2021-11-12 22:26:50 -03:00
7b4a54f71a
FORCING: Use workspace in inject_fmodes_block().
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2021-11-12 14:10:53 -03:00
14dd5039ab
Revert "SOURCES: Use workspace in refinement criterion calculation."
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This reverts commit 1860fe97b093cb825171d495ab075bee0a51bc03.
This comming introduced a circular dependency.
2021-11-12 14:08:04 -03:00
1860fe97b0
SOURCES: Use workspace in refinement criterion calculation.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2021-11-12 13:55:29 -03:00
86ed6e9fac
Merge pull request 'Memory usage reduction.' ( #15 ) from memory_usage_reduction into master
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Reviewed-on: https://hydra-each.nsupdate.info:3001/gkowal/amun-code/pulls/15
2021-11-12 13:16:17 -03:00
d5a5c612e0
MESH: Increase the workspace default size.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2021-11-12 12:56:16 -03:00
0c1dab5a95
SCHEMES: Eliminate local arrays from update_flux().
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However, the arrays which are used to store the reconstructed primitive
variables at Riemann states are passed now from update_increment() in
module EAVOLUTION. These arrays use the common workspace.
The array used for 4-vector velocity reconstruction is removed by
utilizing the output array for fluxes.
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2021-11-12 12:43:40 -03:00
d4e442ead3
SOURCES: Use workspace in update_sources().
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2021-11-12 11:53:43 -03:00
812bd1b2f9
MESH: Quit, if workspace cannot be increased in prolong_block().
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2021-11-12 10:08:49 -03:00
f045189b8d
EVOLUTION: Use workspace in update_increment().
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2021-11-12 10:05:43 -03:00
9acf0bdb0d
Revert "EVOLUTION: Use workspace in initialize_time_step()."
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This reverts commit 4bb02028df6bc4dd9fa21e7689131592c6466d86.
We need to use workspace in update_increment().
Subroutine initialize_time_step() is called only once at the beginning,
so it is fine to use allocated arrays here.
2021-11-12 09:35:17 -03:00
4bb02028df
EVOLUTION: Use workspace in initialize_time_step().
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2021-11-12 09:15:15 -03:00
e01285e903
MESH: Export nwork too.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2021-11-12 09:10:54 -03:00
f28803350b
MESH: Use workspace in prolong_block().
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2021-11-12 08:57:53 -03:00
024fd4b82f
MESH: Add a common workspace to be used in various modules.
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This workspace removes the necessity of allocating the local subroutine
arrays. It is allocated once in initialize_mesh() and can be used in any
place of the code. By default, the size of this workspace is controlled
by the block dimensions, the number of variables, and the simulation
dimension, but it can be controlled by a parameter 'workspace_size'.
Additionally, there is a logical flag 'work_in_use' exported from this
module to permit the verification if the workspace is currently in use.
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2021-11-12 08:07:59 -03:00
58605eb177
FORCING: Use %dU instead of local arrays for acceleration.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2021-11-11 20:35:25 -03:00
2dc4d3ca17
EVOLUTION: Make the arrays allocatable in initialize_time_step().
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Two arrays used in the initial time step estimation, sc and df, are
allocated only if the integration methods support the estimation of
error.
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2021-11-11 18:09:30 -03:00
8e7369388f
REFINEMENT: Use data block's %du for the refinement criterion.
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Each data block has a field %du which is used only during the
integration step (module EVOLUTION). Therefore, it can be used as a
temporary array to store the vorticity and the current density in case
these refinement criterions are used.
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2021-11-11 17:54:54 -03:00
d8e0f2954d
MESH: Rewrite redistribute_blocks().
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This rewrite removes large buffers used by the MPI exchange of data
block arrays between processes.
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2021-11-11 17:31:50 -03:00
1f7906271a
MESH: Rewrite prepare_sibling_derefinement().
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This removes the use of extra buffer for MPI block exchange. The
exchange is now a zero-copy operation.
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2021-11-11 17:08:12 -03:00
