4d619e1699
TIMERS: Correct integer kind for counters.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2020-08-06 14:11:25 -03:00
4b63c17b07
MESH: Remove unused variables.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2020-08-06 13:23:40 -03:00
7c47fb1637
DOMAINS: Clean up unused variables.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2020-08-06 13:12:23 -03:00
1550ce27a9
COORDINATES: Clean up unused variables for 3D case.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2020-08-06 13:08:13 -03:00
07ee9942e5
BOUNDARIES: Clean up unused variables.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2020-08-06 13:04:59 -03:00
0d2ed01c8f
ALGEBRA: Rewrite to eliminate compiler warnings.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2020-08-06 11:58:51 -03:00
1e250afb24
INTEGRALS: Clean up unused variables.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2020-08-06 10:52:51 -03:00
f9ab0b2015
EVOLUTIONS: Clean up ununsed variables.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2020-08-06 10:44:36 -03:00
a0acaa9f40
FORCING: Clean up compiler warnings.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2020-08-06 10:40:17 -03:00
ebccb96d0f
FORCING, IO: Make conversion to complex numbers double precision.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2020-08-06 10:30:43 -03:00
a6f4e168f3
RANDOM: Clean up compiler warnings.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2020-08-06 10:22:41 -03:00
96595b7012
MPITOOLS: Remove unused variable from finalize_mpitools().
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2020-08-06 09:55:02 -03:00
961774c7fb
EQUATIONS: Make sure Alfven speed is never larger than fast one.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2020-08-04 11:16:40 -03:00
88138269b7
SCHEMES: Remove 'hlld-m' from the available Riemann solvers.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2020-07-31 21:12:58 -03:00
0e7f1a3f15
SCHEMES: Use Mignone's isothermal Riemann solver as HLLD.
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Remove the modified version which allows for the density jump in the
intermediate state.
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2020-07-31 21:10:20 -03:00
1b075026b5
CMAKE: Add description, home page and languages to project.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2020-07-31 13:21:02 -03:00
85496f7a78
IO: Remove unused procedures and variables.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2020-07-31 12:52:33 -03:00
e057f240bd
DRIVER: Fix compiler warnings.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2020-07-31 10:51:37 -03:00
7fe1711454
BLOCKS: Remove unused subroutines, variables, and arguments.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2020-07-31 10:48:14 -03:00
e1087c6fb7
IO: Intel Fortran need directory=, not file= in INQUIRE.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2020-07-30 17:12:20 -03:00
9c690c5a4d
DRIVER: Make signal handling work with GNU, PGI and Intel compilers.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2020-07-30 16:15:46 -03:00
11e3a669fe
MAKEFILE: Add initial support for CMake.
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Just call ccmake <path to AMUN code> and set options.
GNU Fortran, Intel Fortran and PGI Fortran are supported.
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2020-07-30 12:58:49 -03:00
cf95264a88
IO: Intel compiler does not accept sizeof() as argument.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2020-07-30 12:41:31 -03:00
98fc748f9b
FORCING: Initialize status argument.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2020-07-30 12:05:34 -03:00
ebc24c3f03
IO: Avoid using the same names for variables and modules.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2020-07-30 12:02:13 -03:00
91a1ce442e
DRIVER: PGI compiler requires signal definition.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2020-07-30 11:49:43 -03:00
7c55b65bd7
DRIVER, MESH, INTEGRALS: Use predefined preprocessor macros.
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GNU Fortran and Intel Fortran define preprocessor macros such
__GFORTRAN__ and __INTEL_COMPILER. Just use them.
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2020-07-30 11:06:59 -03:00
947ed1ad78
PARAMETERS: Use Fortran 2003 command line subroutines.
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Fortran 2003 introduces procedures to get the number of command line
arguments and the specific argument. Use them instead of iargc() and
getarg() from GNU extension.
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2020-07-30 10:23:31 -03:00
31a34c4380
PARAMETERS: Add verbose flag to read_parameters().
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Slightly clean up other subroutines.
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2020-07-30 10:13:48 -03:00
04169ad0f7
PARAMETERS: Remove subroutine redistribute_parameters().
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2020-07-30 10:01:56 -03:00
62e989e0b7
DRIVER: Read parameters' file by all processes.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2020-07-30 10:00:12 -03:00
7495681330
PYTHON: Add electric field components and its magnitude.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2020-07-20 16:26:21 -03:00
5bd541333c
PYTHON: Add vorticity and current density components to AmunXML.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2020-07-20 16:11:49 -03:00
84a3ce1572
PYTHON: Change formatting to use .format() in AmunXML class.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2020-07-17 16:41:50 -03:00
ad3d9eec93
PYTHON: Add simple progress to AmunXML.dataset().
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2020-07-17 16:37:04 -03:00
4b9aba7d75
PYTHON: Fix reading datasedt for non-square/non-cube domain.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2020-05-13 22:06:53 -03:00
5c64df35e5
HASH: Remove obsolete specific xxh64_*() functions.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2020-05-13 17:32:04 -03:00
d41ec74665
IO: Use generic xxh64() to calculate all hashes.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2020-05-13 17:31:59 -03:00
467609bc00
HASH: Add generic function xxh64().
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This function calculates the XXH64 has using a sequence of bytes, or
integer(kind=1) vector.
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2020-05-13 17:31:48 -03:00
3dbbd0b8b1
HASH: Change kind of local variables.
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Local variables remain and offset cannot be larger than the size of
input array, so they can be 4-byte integers.
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2020-05-13 08:32:27 -03:00
e1e025017a
HASH: Rename argument data to input.
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Word DATA is reserved in Fortran. Rename this argument, just to avoid
confusion.
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2020-05-13 07:05:44 -03:00
86c7f87365
HASH: Fix hash calculation in xxh64_integer() for odd length vectors.
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If the input data has an odd number of elements, the last 4-byte
element has to be padded by 4-byte structure of zeros.
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2020-05-13 06:57:26 -03:00
97e572ec94
IO: Make sure bounds have the same domensions while stored and read.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2020-05-13 06:49:53 -03:00
ca3580e2ec
IO: Fix wrong warning while reading from an XML+binary restart snapshot.
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If the forcing is off, the number of forcing modes is zero, but it is
not the same as a wrong number of forcing modes stored in the restart
file.
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2020-05-13 06:47:38 -03:00
7faf27e3b9
PYTHON: Use the maximum used level instead of maxlev.
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This reduces the resolution and memory usage if parameter maxlev is
actually larger than the maximu used level.
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2020-05-12 14:51:37 -03:00
ac7697158a
PYTHON: Fix extras in setup.py.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2020-05-12 07:41:15 -03:00
425bcc2f17
PYTHON: Verify binary data hashes if python-xxhash is available.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2020-05-12 07:31:12 -03:00
1c76a5b8ca
BLOCKS: Reset fields of allocated datablock to zero.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2020-05-12 06:51:54 -03:00
5fc6b8dbe5
RANDOM: Fix bitwise OR in splitmix64(), xoshiro256p(), and jump().
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2020-05-11 18:47:19 -03:00
7c1d028805
IO: Store hashes in write_snapshot_xml().
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2020-05-11 18:42:05 -03:00
