20cb799fba
MPITOOLS: Fix argument intent in exchange_arrays().
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2021-11-01 13:11:35 -03:00
e352c2cb0e
HOSTS: Add support for NVIDIA HPC compilers.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2021-11-01 11:33:50 -03:00
2098661d3c
EQUATIONS: Remove cruft.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2021-10-30 16:59:32 -03:00
8d5f356d8d
MPITOOLS: A real value and array are the same for NVIDIA compiler.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2021-10-30 16:53:35 -03:00
0ff346597d
HELPERS: fnum() is GNU Fortran specific.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2021-10-29 11:55:43 -03:00
f567a9ddf8
USER_PROBLEM: Pass the simulation time to user_time_statistics().
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2021-10-26 12:01:01 -03:00
b0401e96c6
PROBLEMS: Pass the run count to user problem initialization.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2021-10-26 11:59:11 -03:00
6187c6d76d
USER_PROBLEM: Rename user gravitational acceleration subroutine.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2021-10-26 09:09:13 -03:00
8c808fd70c
USER_PROBLEM: Rename subroutines boundary_user_() to user_boundary().
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2021-10-26 09:02:43 -03:00
22455676f4
USER_PROBLEM: Add user_time_statistics() to module USER_PROBLEM.
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This file can we use to calculate and store the user defined time
statistics.
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2021-10-26 09:00:03 -03:00
94a621a3c5
USER_PROBLEM: Rename use problem subroutines.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2021-10-26 08:52:03 -03:00
6362fe13ad
EVOLUTION: Fix partial times and timesteps in 3S*+ methods.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2021-10-23 20:52:03 -03:00
8297482639
IO: Store 'cmax' so we can properly resume jobs.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2021-10-23 11:23:58 -03:00
44ea63bc3d
EVOLUTION: Implement optimized embedded methods by Ranocha et al.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2021-10-20 18:08:54 -03:00
27041d0feb
DRIVER, EVOLUTION, IO: Rewrite handling precise snapshots.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2021-10-19 14:03:57 -03:00
55b0d24b77
EVOLUTION: Rework slightly the way new time step is calculated.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2021-10-19 13:28:25 -03:00
c604467a5c
DRIVER: Use the initialize_time_step() instead of new_time_step().
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2021-10-19 13:15:04 -03:00
d501b19041
EVOLUTION: Implement estimation of the initial time step.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2021-10-19 13:11:41 -03:00
6ca36c93e3
DRIVER, EVOLUTION: Move dtnext to evolution module.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2021-10-18 11:33:14 -03:00
0c8d8fac9c
EVOLUTION: Rewrite SSPRK4(2)M integration method.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2021-10-16 19:03:25 -03:00
e7612f5cfd
PYTHON: It should be 'block x of y'.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2021-10-15 23:03:26 -03:00
418a580888
EVOLUTION: Print 'err/tol' not the error during the integration.
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This is more meaninful, since it shows the ratio of the maximum error to
the tolerance atol + rtol * max(U).
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2021-10-15 15:29:42 -03:00
155b5d7575
EVOLUTION: Implement L2 and maximum norms for error calculation.
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Alow the user to choose between these two norms.
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2021-10-15 13:51:25 -03:00
271af020df
EVOLUTION: Implement 3rd order embedded SSP3(2)4 with error control.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2021-10-15 12:15:14 -03:00
27b6daebca
PYTHON: Version 0.9.5
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2021-10-06 18:06:43 -03:00
0d4e955eb0
PYTHON: Reduce dimensions for 2D datasets in AmunH5.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2021-10-06 18:06:07 -03:00
9a7235b72d
PYTHON: Use None for fields in chunks with dblocks == 0.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2021-10-06 18:05:58 -03:00
51cc3ea83b
PYTHON: Determine toplev only for chunks with dblocks > 0.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2021-10-06 18:05:46 -03:00
d217d092ab
PYTHON: Version 0.9.4
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2021-10-06 13:31:05 -03:00
e13bd00a0e
PYTHON: Replace numpy.empty with numpy.zeros in AmunXML.__fill_chunks().
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2021-10-06 13:07:57 -03:00
07fc5c20b0
PYTHON: Create empty chunk fields for chunks with no dblocks.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2021-10-06 13:02:31 -03:00
5eec85e598
PYTHON: Version 0.9.3.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2021-10-06 10:06:16 -03:00
ec8ddac795
PYTHON: Add velocity and magnetic field components.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2021-10-06 10:05:18 -03:00
f4df543b2c
PYTHON: Import numpy without abbreviation.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2021-10-06 09:44:49 -03:00
b7496e0b3d
PYTHON: Make sure dataset() accepts maxlev > 9.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2021-10-06 09:37:15 -03:00
c2c9c37b45
PYTHON: Version 0.9.2
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2021-10-05 11:12:07 -03:00
6945b90b66
PYTHON: Export WriteVTK through the AmunPy interface.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2021-10-05 11:11:17 -03:00
5a8526ef82
PYTHON: Version 0.9.1.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2021-10-05 10:59:39 -03:00
1c4fa6035d
PYTHON: Rewrite vtkio.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2021-10-05 10:58:44 -03:00
e153cd417e
PYTHON: Rewrite interpolations.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2021-10-05 10:19:18 -03:00
d714974b33
PYTHON: Restore zmin/zmax/zblocks for 2D AmunXML snapshots.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2021-10-05 09:38:49 -03:00
b6edd6ca97
PYTHON: Version 0.9
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2021-10-05 09:13:24 -03:00
764c1596b5
PYTHON: Improve comments in AmunH5 structures.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2021-10-05 09:09:24 -03:00
919e0ce6c2
PYTHON: Separate deprecated AmunH5 functions.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2021-10-05 09:05:57 -03:00
dbf977de36
PYTHON: Rewrite AmunXML class to use Amun base class.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2021-10-05 09:03:23 -03:00
61d5eeb839
PYTHON: Convert returns to exceptions in Amun class.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2021-10-04 22:24:08 -03:00
8e125253f7
PYTHON: Make AmunH5 class public.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2021-10-04 22:19:43 -03:00
da339f1ac9
PYTHON: Implement AmunH5 class for Amun's HDF5 format.
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Mark the previous subroutines deprecated.
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2021-10-04 22:17:53 -03:00
d28194dc23
PYTHON: Add amun.py defining the base class for Amun snapshots.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2021-10-04 22:15:59 -03:00
abd1749945
PYTHON: Use None for no compression of VTK files.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2021-10-04 22:14:30 -03:00
