758c712991
MESH: Rewrite initialization and statistics.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2013-12-26 19:51:26 -02:00
fa87332225
REFINEMENT: Improve comments.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2013-12-26 18:07:23 -02:00
7bf2d7f438
REFINEMENT: Add timers to count timing of refinement.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2013-12-26 18:04:02 -02:00
4c081a84bb
DRIVER: Improve the run/save time handling.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2013-12-26 17:54:56 -02:00
a7eed177c1
REFINEMENT: Rewrite the refined variable selection.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2013-12-26 17:32:11 -02:00
e19cf534b5
COORDINATES: Fix the formatting again.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2013-12-23 23:10:39 -02:00
ec5516fae1
COORDINATES: Fix information formatting.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2013-12-23 21:52:58 -02:00
e1d554aea7
DOMAINS: Do not allocate data blocks in setup_domain().
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The initial data block structure is fully allocated in generate_mesh()
of module MESH.
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2013-12-23 21:38:37 -02:00
156d8cf1dd
MESH: Rewrite generate_mesh().
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The new version uses the minimum amount of memory (1 data block per
process) with a small sacrifice of the problem initialization speed.
This version fully supports 2D and 3D with and without MPI.
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2013-12-23 21:35:30 -02:00
3052f9aa04
BLOCKS: Replace associate_blocks() with link/unlink_block().
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2013-12-23 18:19:13 -02:00
853618b874
MESH: Replace deallocate_datablock() with remove_datablock().
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2013-12-23 17:44:36 -02:00
42c39c5736
BLOCKS: Rewrite data block allocate/removal subroutines.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2013-12-23 17:40:49 -02:00
bc095863c7
IO: Revert comment from the last commit.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2013-12-23 16:44:56 -02:00
3e5f8407f6
IO: Store metablocks only if there are some.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2013-12-23 16:44:15 -02:00
9517e6ce4c
SCHEMES: Implement isothermal MHD HLLD-M Riemann solver.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2013-12-20 14:01:33 -02:00
3735112d9a
SCHEMES: Implement isothermal MHD HLLD Riemann solver.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2013-12-20 13:53:45 -02:00
7f63bd65be
Remove unused preprocessor flags.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2013-12-19 19:09:01 -02:00
5662c2e4b7
COORDINATES: Fix grammar in initialize_coordinates().
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2013-12-19 15:03:33 -02:00
aaf75ab123
REFINEMENT: Avoid division by zero in second_derivative_error().
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2013-12-19 14:51:58 -02:00
85b92c8090
REFINEMENT: Take absolute values in the error calculation.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2013-12-19 14:47:12 -02:00
072f234e0f
REFINEMENT: Rewrite check_refinement_criterion().
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Move the second derivative error estimation to another subroutine and
allow to specify which variables should control the refinement.
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2013-12-19 14:36:37 -02:00
b73ce00ddb
INTERPOLATIONS: Implement LimO3 reconstruction.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2013-12-19 10:38:40 -02:00
1d961330e7
BOUNDARIES: Fix group summation in boundary_restrict().
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2013-12-19 10:26:39 -02:00
c1afbb46c8
BOUNDARIES: Group summation in boundary_restrict().
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2013-12-19 10:25:02 -02:00
b21b7f99d1
MESH: Change summation order in restrict_block().
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2013-12-19 10:18:06 -02:00
2a8eee95c0
BOUNDARIES: Rewrite boundary_restrict().
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Make sure that the summation produces symmetric error.
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2013-12-19 10:09:08 -02:00
70d43808b0
MESH: Rewrite restrict_block().
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Make sure that the summation symmetry is preserved.
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2013-12-19 09:48:53 -02:00
345787270d
IO: Rewrite subroutines to store variables.
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We store now either primitive 'p' or conservative variables 'c' with or
without ghost cells. The ghost cells storing is determined by
additional runtime parameter 'include_ghosts'.
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2013-12-19 07:32:40 -02:00
6bc5fb67c6
IO: Remove unused references in write_variables_h5().
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2013-12-18 22:19:46 -02:00
38793e5716
IO: Clean up subroutine write_variables_h5().
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2013-12-18 22:17:49 -02:00
c5eb20b2cf
SCHEMES: Implement HLLD solver for adiabatic MHD.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2013-12-12 16:38:25 -02:00
63127e83b1
SCHEMES: Implement HLLC solver for adiabatic MHD.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2013-12-12 16:25:30 -02:00
360fc7a0c6
PROBLEMS: Rewrite blast problem.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2013-12-12 16:09:47 -02:00
e9d48d078f
Make MHD equations work.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2013-12-12 15:36:55 -02:00
2f724b0df7
EQUATIONS: Release pointer in finalize_equations().
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2013-12-12 14:39:18 -02:00
a347422a3b
INTERPOLATIONS: Implement 3rd order WENO reconstruction.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2013-12-12 14:32:27 -02:00
03ca542dfd
INTERPOLATIONS: Improve printed methods formatting.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2013-12-12 13:52:05 -02:00
0dc7b24c43
Replace minmod3 with the proper limiter() function.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2013-12-12 12:41:55 -02:00
45f80a0dc7
INTERPOLATIONS: Reimplement TVD method with more limiters.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2013-12-12 12:34:05 -02:00
a59220bac3
EVOLUTION: Remove parameter dtini.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2013-12-11 22:48:48 -02:00
a8e06fa535
INTERPOLATIONS: rewrite module, use procedure pointers.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2013-12-11 22:34:29 -02:00
618969e22e
Delete cruft after FORCING removal.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2013-12-11 18:13:12 -02:00
3e09fa8088
Remove module FORCING.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2013-12-11 18:10:35 -02:00
a1ceb1c10f
Remove source terms directives.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2013-12-11 18:09:35 -02:00
a6c0059b32
Remove remainings of the preprocessor flags EQS and EOS.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2013-12-11 18:04:36 -02:00
e6eed67589
PROBLEMS: Remove setting magnetic field in the blast problem.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2013-12-11 17:55:16 -02:00
e5db34b7c4
IO: Make storing arrays more general.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2013-12-11 17:54:39 -02:00
cd3fb66540
Remove some MHD preprocessor directives.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2013-12-11 17:34:33 -02:00
5c064987e4
DRIVER: Cleanups.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2013-12-11 17:29:15 -02:00
e2c80a5552
TIMERS: Rewrite slightly.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2013-12-11 17:18:56 -02:00
