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77 Commits

Author SHA1 Message Date
Grzegorz Kowal
f199e231e6 EVOLUTION, IO: Add tolerances, interations and rejections counters. 
Store these variables in restart snapshots.

Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
 2020-09-01 16:38:11 -03:00
Grzegorz Kowal
73e2743e07 DRIVER: Print maximum error. 
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
 2020-08-28 23:07:32 -03:00
Grzegorz Kowal
c15378bddd MPITOOLS: Rewrite MPI support using Fortran 2008 interface. 
Use procedure interfaces, remove unused variables, etc.

Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
 2020-08-14 19:40:10 -03:00
Grzegorz Kowal
5faf08f731 SHAPES: Remove unused argument from initialize_shapes(). 
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
 2020-08-06 14:48:47 -03:00
Grzegorz Kowal
812338f427 OPERATORS: Remove unused argument from initialize_operators(). 
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
 2020-08-06 14:31:12 -03:00
Grzegorz Kowal
6d518c8327 PROBLEMS: Clean up unused variables. 
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
 2020-08-06 14:28:13 -03:00
Grzegorz Kowal
4b63c17b07 MESH: Remove unused variables. 
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
 2020-08-06 13:23:40 -03:00
Grzegorz Kowal
7c47fb1637 DOMAINS: Clean up unused variables. 
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
 2020-08-06 13:12:23 -03:00
Grzegorz Kowal
07ee9942e5 BOUNDARIES: Clean up unused variables. 
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
 2020-08-06 13:04:59 -03:00
Grzegorz Kowal
e057f240bd DRIVER: Fix compiler warnings. 
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
 2020-07-31 10:51:37 -03:00
Grzegorz Kowal
7fe1711454 BLOCKS: Remove unused subroutines, variables, and arguments. 
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
 2020-07-31 10:48:14 -03:00
Grzegorz Kowal
9c690c5a4d DRIVER: Make signal handling work with GNU, PGI and Intel compilers. 
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
 2020-07-30 16:15:46 -03:00
Grzegorz Kowal
91a1ce442e DRIVER: PGI compiler requires signal definition. 
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
 2020-07-30 11:49:43 -03:00
Grzegorz Kowal
7c55b65bd7 DRIVER, MESH, INTEGRALS: Use predefined preprocessor macros. 
GNU Fortran and Intel Fortran define preprocessor macros such
__GFORTRAN__ and __INTEL_COMPILER. Just use them.

Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
 2020-07-30 11:06:59 -03:00
Grzegorz Kowal
31a34c4380 PARAMETERS: Add verbose flag to read_parameters(). 
Slightly clean up other subroutines.

Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
 2020-07-30 10:13:48 -03:00
Grzegorz Kowal
62e989e0b7 DRIVER: Read parameters' file by all processes. 
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
 2020-07-30 10:00:12 -03:00
Grzegorz Kowal
a533978dff DRIVER: read_snapshot_parameter() is supported independently of HDF5. 
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
 2020-04-29 17:39:19 -03:00
Grzegorz Kowal
408f42151d IO, DRIVER: Store x/y/zblocks separately. 
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
 2020-04-28 14:40:04 -03:00
Grzegorz Kowal
63013b25be DRIVER: Fix compilation with empty OUTPUT flag. 
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
 2020-04-28 14:31:53 -03:00
Grzegorz Kowal
6217358c99 RANDOM: Add status argument to initialize_random(). 
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
 2020-04-28 14:04:22 -03:00
Grzegorz Kowal
24d33316ae RANDOM: Change Marsaglia's xorshift to Vigna's xoshiro256+ generator. 
Completely rewrite the random generator module. The new method is
true 64-bit floating point generator in contrast to 32-bit Marsaglia's
methods. Add recommended seeds' initialization and jump for parallel
computations. Make function names more meaningful and add new functions
in IO module to store the seeds properly.

Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
 2020-04-25 18:37:58 -03:00
Grzegorz Kowal
b76eec7022 DRIVER: Print forcing parameters. 
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
 2020-04-20 13:13:20 -03:00
Grzegorz Kowal
c0df378235 Merge branch 'master' into forcing 2020-04-07 16:24:15 -03:00
Grzegorz Kowal
ad0303d3ba Update copyright. 
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
 2020-03-02 13:18:53 -03:00
Grzegorz Kowal
a80b8cf41f BOUNDARIES, DRIVER, EVOLUTION: Use nf for the number of block fluxes. 
Now, since the number of variables and fluxes may be different, it is
important to keep the size of the block flux array using nf instead of
nv.

Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
 2019-10-02 15:39:25 -03:00
Grzegorz Kowal
76d7cf8826 IO, DRIVER, PYTHON: Fix domain block dimensions with job restart. 
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
 2019-02-21 15:58:38 -03:00
Grzegorz Kowal
e1ee6f39bb DRIVER: There is no need to limit tm_exec. 
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
 2019-02-18 17:07:52 -03:00
Grzegorz Kowal
a66cd2e27f DRIVER: Fix ETA and EXECUTION time calculation. 
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
 2019-02-18 16:57:35 -03:00
Grzegorz Kowal
5086bf6bd4 DRIVER: Print problem name before initializations. 
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
 2019-02-18 12:07:02 -03:00
Grzegorz Kowal
035db8370a Merge branch 'master' into forcing 
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
 2019-02-15 18:26:13 -02:00
Grzegorz Kowal
da9e895406 DRIVER: Use check_status() to verify subroutine status flag. 
In addition, print error in case of any initialization or finalization
subroutine indicates problems.

Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
 2019-02-12 13:59:17 -02:00
Grzegorz Kowal
721cf8efae EVOLUTION: Add status argument to advance(). 
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
 2019-02-12 10:34:38 -02:00
Grzegorz Kowal
5368b60f18 MESH: Add status argument to generate_mesh(). 
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
 2019-02-12 10:22:53 -02:00
Grzegorz Kowal
e6faf7dea9 BLOCKS: Remove set_block_dimensions(). 
Instead, initialize block dimensions through initialize_blocks().

Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
 2019-02-11 13:30:02 -02:00
Grzegorz Kowal
55b8e2f073 BLOCKS: Add status argument to build/wipe_leaf_list(). 
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
 2019-02-11 12:56:14 -02:00
Grzegorz Kowal
3b352c89ee INTERPOLATIONS, DRIVER: Correct nghosts in initialize_interpolations(). 
The number of ghosts zone is important for the selected recontruction.
For higher order reconstruction methods, nghosts >= 4 usually.
Therefore, initialize interpolations before coordinates and correct the
number of ghost zone according to the selected interpolation method.

Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
 2019-02-11 11:27:22 -02:00
Grzegorz Kowal
601adc8037 IO, DRIVER: Allow for restart with different number of ghost zones. 
Now we can restart from restart snapshots with different number of ghost
zones. Also, remove the old restart snapshot format support from
read_datablocks_h5().

Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
 2019-02-11 11:02:36 -02:00
Grzegorz Kowal
cfe9614db2 MPITOOLS: Update the initialization/finalization status flag. 
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
 2019-02-11 09:36:02 -02:00
Grzegorz Kowal
40f15e3117 INTEGRALS: Update the initialization/finalization status flag. 
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
 2019-02-11 08:38:15 -02:00
Grzegorz Kowal
dc8c1aaaa7 DRIVER: Do not print timings in the case of initialization errors. 
If there was any problem with the initialization, there is no point in
printing the timings. Just leave the last error message and quit the
program.

Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
 2019-02-08 09:56:51 -02:00
Grzegorz Kowal
3dc8f57fb5 DRIVER: Use bcells instead of im, jm, km. 
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
 2019-02-04 17:57:06 -02:00
Grzegorz Kowal
eb7b5aa775 DRIVER, HELPERS: Print problem name in the main program part. 
Also add print_parameter_string() to module HELPERS.

Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
 2019-01-30 18:33:04 -02:00
Grzegorz Kowal
cb2b0c60ef HELPERS: Add module with helper subroutines. 
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
 2019-01-30 18:22:54 -02:00
Grzegorz Kowal
4eb292c67d DRIVER: Small change in welcome message and MPI process number. 
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
 2019-01-30 15:34:39 -02:00
Grzegorz Kowal
0582774e10 SHAPES, DRIVER: Add print_shapes(). 
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
 2019-01-30 15:32:34 -02:00
Grzegorz Kowal
a97bbc736f INTERPOLATIONS, DRIVER: Add print_interpolations(). 
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
 2019-01-30 15:17:21 -02:00
Grzegorz Kowal
122d228248 SCHEMES, DRIVER: Add print_schemes(). 
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
 2019-01-30 14:58:40 -02:00
Grzegorz Kowal
63bde5a72b EVOLUTION, DRIVER: Add print_evolution(). 
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
 2019-01-30 14:45:07 -02:00
Grzegorz Kowal
d32f7bb21a REFINEMENTS, DRIVER: Add print_refinement(). 
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
 2019-01-30 12:47:15 -02:00
Grzegorz Kowal
838ec1e465 BOUNDARIES, DRIVER: Add print_boundaries(). 
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
 2019-01-30 12:29:48 -02:00