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77122f8854
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COMPRESSION: Implement compression level for LZ4 compression.
Also increase the compression buffer and turn on internal checksum.
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
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2020-08-18 18:01:12 -03:00 |
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ec8683a7a0
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COMPRESSION: Add CRC64 check to LZMA compression.
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
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2020-08-18 17:58:10 -03:00 |
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fec8708ac9
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IO: Update header for XML files to be compatible with Python.
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
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2020-08-18 12:20:52 -03:00 |
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e509ea4e9a
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IO: Change order of attributes in write_attribute_xml_file().
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
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2020-08-18 11:58:53 -03:00 |
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88f3c44b52
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IO: Rename compression level for HDF5.
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
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2020-08-17 18:35:12 -03:00 |
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5886c2039a
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PYTHON: Update adiabatic index name.
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
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2020-08-16 17:00:50 -03:00 |
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2327e6ffa5
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PROBLEMS: Update parameters for sound speed and adiabatic index.
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
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2020-08-16 16:49:24 -03:00 |
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6bf3afcf0b
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EQUATIONS: Rename parameter 'csnd' to 'sound_speed'.
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
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2020-08-16 16:46:27 -03:00 |
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fda340b21b
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EQUATIONS: Rename gamma to adiabatic_index.
Keyword 'gamma' is reserved in Fortran for calculating Gamma function.
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
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2020-08-16 16:41:28 -03:00 |
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14635cb208
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CMake: Update home page.
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
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2020-08-15 16:25:12 -03:00 |
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b8e71a4fb0
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INTERPOLATIONS: Remove unused variables in 2D case.
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
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2020-08-15 01:33:43 -03:00 |
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8f33e4aeb5
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EQUATIONS: Remove unused variables for 2D case.
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
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2020-08-15 01:28:28 -03:00 |
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17395086fb
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REFINEMENT: Remove unused variables for 2D case.
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
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2020-08-15 01:27:08 -03:00 |
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d05e3062fc
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FORCING: Remove unused variables for 2D case.
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
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2020-08-15 01:25:31 -03:00 |
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02b2d5d1bd
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CMAKE: Do not warn about dummy arguments.
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
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2020-08-15 01:14:04 -03:00 |
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9e507b283c
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SOURCES: Remove unused variable for 2D case.
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
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2020-08-15 01:12:41 -03:00 |
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e75089ed19
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INTERPOLATIONS: Check correctness of ngp just after reading it.
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
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2020-08-15 01:09:52 -03:00 |
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5a04b17ab3
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MPITOOLS: Fix compilation without MPI.
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
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2020-08-14 21:54:46 -03:00 |
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c15378bddd
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MPITOOLS: Rewrite MPI support using Fortran 2008 interface.
Use procedure interfaces, remove unused variables, etc.
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
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2020-08-14 19:40:10 -03:00 |
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701bb6618b
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Merge branch 'revert-9b7fe356' into 'master'
Revert "Update .gitlab-ci.yml to use .pre stage."
See merge request gkowal/amun-code!1
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2020-08-14 13:44:48 +00:00 |
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8108a445a3
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Revert "Update .gitlab-ci.yml to use .pre stage."
This reverts commit 9b7fe356505ddd275a45ca64395da0fa9544941f
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2020-08-14 13:42:18 +00:00 |
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9b7fe35650
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Update .gitlab-ci.yml to use .pre stage.
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2020-08-14 13:39:58 +00:00 |
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6833a0d741
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Update .gitlab-ci.yml
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2020-08-14 13:27:08 +00:00 |
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2e360eef31
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CI/CD: Add building with cmake to piplines.
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
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2020-08-14 10:12:43 -03:00 |
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a1b47ab1e1
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README: Update features and add CMake compilation steps.
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
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2020-08-13 16:35:39 -03:00 |
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65f882fe99
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MAKEFILE: Update files for compression support in XML+binary format.
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
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2020-08-13 16:15:05 -03:00 |
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38a205e1c7
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PYTHON: Update installation script.
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
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2020-08-13 15:52:18 -03:00 |
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d048159798
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COMPRESSION: Add LZMA/XZ compression format.
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
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2020-08-13 15:42:07 -03:00 |
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f9b6dd47e9
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COMPRESSION: Use LZ4 frame for compatibility with command lz4.
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
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2020-08-13 09:17:09 -03:00 |
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b05f186765
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COMPRESSION: Use allocated buffer for ZSTD compression.
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
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2020-08-11 15:36:20 -03:00 |
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eb7c8dbd76
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COMPRESSION, PYTHON: Add support for LZ4 compression.
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
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2020-08-11 15:28:20 -03:00 |
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2012a5eb92
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IO: Remove compression suffix if the file is not compressed.
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
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2020-08-11 15:01:26 -03:00 |
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575c626b0a
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PYTHON: Add compression support to AmunPy module.
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
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2020-08-11 12:14:39 -03:00 |
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af4da9444a
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IO: Store compression format in binary file attributes.
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
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2020-08-11 12:00:42 -03:00 |
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0006459521
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IO: Remove debug info.
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
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2020-08-11 09:32:51 -03:00 |
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352f7a7c1b
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IO: Fix file name in write_binary_xml(), when compression is inefficient.
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
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2020-08-10 20:46:20 -03:00 |
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c209000fb2
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IO: Fix binary restart snapshot storing when the compression is on.
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
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2020-08-10 20:29:25 -03:00 |
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e0a4f2a4a5
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IO: Print compression format and level of XML+binary files.
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
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2020-08-10 16:52:16 -03:00 |
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053392e762
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COMPRESSION: Add Zstandard compression support.
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
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2020-08-10 16:48:31 -03:00 |
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8b475b880b
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IO: Add storing compressed fields in write_snapshot_xml().
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
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2020-08-10 16:32:42 -03:00 |
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36996e6f76
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IO: Add compressed field to the XML file attribute.
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
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2020-08-10 16:22:37 -03:00 |
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1d154ab492
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IO: Support compression in write_binary_xml().
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
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2020-08-10 16:03:46 -03:00 |
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08b7e81f6a
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COMPRESSION, IO: Initialize compression in initialize_io().
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
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2020-08-10 15:34:20 -03:00 |
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ab3b5d6877
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COMPRESSION: Add module to handle data compression.
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
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2020-08-10 15:12:40 -03:00 |
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d3e7ab7c5d
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IO: Fix job restart after with new XML structure for binary files.
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
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2020-08-10 11:51:23 -03:00 |
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42951cd48c
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IO: Use new XML structure for binary files in write_restart_snapshot_xml().
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
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2020-08-10 10:55:06 -03:00 |
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7867d9d062
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IO: Use new XML structure for binary files in write_snapshot_xml().
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
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2020-08-10 10:32:17 -03:00 |
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220c6028b1
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IO: Add subroutine to write binary file attribute.
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
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2020-08-10 10:23:36 -03:00 |
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97887b2ad6
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IO: Return the number of bytes written to file from write_binary_xml().
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
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2020-08-10 10:09:59 -03:00 |
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35f3e3f2eb
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IO: Add binary file extension before write_binary_xml().
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
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2020-08-10 10:04:05 -03:00 |
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