07ee9942e5
BOUNDARIES: Clean up unused variables.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2020-08-06 13:04:59 -03:00
e057f240bd
DRIVER: Fix compiler warnings.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2020-07-31 10:51:37 -03:00
7fe1711454
BLOCKS: Remove unused subroutines, variables, and arguments.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2020-07-31 10:48:14 -03:00
9c690c5a4d
DRIVER: Make signal handling work with GNU, PGI and Intel compilers.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2020-07-30 16:15:46 -03:00
91a1ce442e
DRIVER: PGI compiler requires signal definition.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2020-07-30 11:49:43 -03:00
7c55b65bd7
DRIVER, MESH, INTEGRALS: Use predefined preprocessor macros.
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GNU Fortran and Intel Fortran define preprocessor macros such
__GFORTRAN__ and __INTEL_COMPILER. Just use them.
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2020-07-30 11:06:59 -03:00
31a34c4380
PARAMETERS: Add verbose flag to read_parameters().
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Slightly clean up other subroutines.
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2020-07-30 10:13:48 -03:00
62e989e0b7
DRIVER: Read parameters' file by all processes.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2020-07-30 10:00:12 -03:00
a533978dff
DRIVER: read_snapshot_parameter() is supported independently of HDF5.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2020-04-29 17:39:19 -03:00
408f42151d
IO, DRIVER: Store x/y/zblocks separately.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2020-04-28 14:40:04 -03:00
63013b25be
DRIVER: Fix compilation with empty OUTPUT flag.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2020-04-28 14:31:53 -03:00
6217358c99
RANDOM: Add status argument to initialize_random().
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2020-04-28 14:04:22 -03:00
24d33316ae
RANDOM: Change Marsaglia's xorshift to Vigna's xoshiro256+ generator.
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Completely rewrite the random generator module. The new method is
true 64-bit floating point generator in contrast to 32-bit Marsaglia's
methods. Add recommended seeds' initialization and jump for parallel
computations. Make function names more meaningful and add new functions
in IO module to store the seeds properly.
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2020-04-25 18:37:58 -03:00
b76eec7022
DRIVER: Print forcing parameters.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2020-04-20 13:13:20 -03:00
c0df378235
Merge branch 'master' into forcing
2020-04-07 16:24:15 -03:00
ad0303d3ba
Update copyright.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2020-03-02 13:18:53 -03:00
a80b8cf41f
BOUNDARIES, DRIVER, EVOLUTION: Use nf for the number of block fluxes.
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Now, since the number of variables and fluxes may be different, it is
important to keep the size of the block flux array using nf instead of
nv.
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2019-10-02 15:39:25 -03:00
76d7cf8826
IO, DRIVER, PYTHON: Fix domain block dimensions with job restart.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2019-02-21 15:58:38 -03:00
e1ee6f39bb
DRIVER: There is no need to limit tm_exec.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2019-02-18 17:07:52 -03:00
a66cd2e27f
DRIVER: Fix ETA and EXECUTION time calculation.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2019-02-18 16:57:35 -03:00
5086bf6bd4
DRIVER: Print problem name before initializations.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2019-02-18 12:07:02 -03:00
035db8370a
Merge branch 'master' into forcing
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2019-02-15 18:26:13 -02:00
da9e895406
DRIVER: Use check_status() to verify subroutine status flag.
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In addition, print error in case of any initialization or finalization
subroutine indicates problems.
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2019-02-12 13:59:17 -02:00
721cf8efae
EVOLUTION: Add status argument to advance().
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2019-02-12 10:34:38 -02:00
5368b60f18
MESH: Add status argument to generate_mesh().
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2019-02-12 10:22:53 -02:00
e6faf7dea9
BLOCKS: Remove set_block_dimensions().
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Instead, initialize block dimensions through initialize_blocks().
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2019-02-11 13:30:02 -02:00
55b8e2f073
BLOCKS: Add status argument to build/wipe_leaf_list().
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2019-02-11 12:56:14 -02:00
3b352c89ee
INTERPOLATIONS, DRIVER: Correct nghosts in initialize_interpolations().
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The number of ghosts zone is important for the selected recontruction.
For higher order reconstruction methods, nghosts >= 4 usually.
Therefore, initialize interpolations before coordinates and correct the
number of ghost zone according to the selected interpolation method.
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2019-02-11 11:27:22 -02:00
601adc8037
IO, DRIVER: Allow for restart with different number of ghost zones.
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Now we can restart from restart snapshots with different number of ghost
zones. Also, remove the old restart snapshot format support from
read_datablocks_h5().
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2019-02-11 11:02:36 -02:00
cfe9614db2
MPITOOLS: Update the initialization/finalization status flag.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2019-02-11 09:36:02 -02:00
40f15e3117
INTEGRALS: Update the initialization/finalization status flag.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2019-02-11 08:38:15 -02:00
dc8c1aaaa7
DRIVER: Do not print timings in the case of initialization errors.
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If there was any problem with the initialization, there is no point in
printing the timings. Just leave the last error message and quit the
program.
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2019-02-08 09:56:51 -02:00
3dc8f57fb5
DRIVER: Use bcells instead of im, jm, km.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2019-02-04 17:57:06 -02:00
eb7b5aa775
DRIVER, HELPERS: Print problem name in the main program part.
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Also add print_parameter_string() to module HELPERS.
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2019-01-30 18:33:04 -02:00
cb2b0c60ef
HELPERS: Add module with helper subroutines.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2019-01-30 18:22:54 -02:00
4eb292c67d
DRIVER: Small change in welcome message and MPI process number.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2019-01-30 15:34:39 -02:00
0582774e10
SHAPES, DRIVER: Add print_shapes().
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2019-01-30 15:32:34 -02:00
a97bbc736f
INTERPOLATIONS, DRIVER: Add print_interpolations().
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2019-01-30 15:17:21 -02:00
122d228248
SCHEMES, DRIVER: Add print_schemes().
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2019-01-30 14:58:40 -02:00
63bde5a72b
EVOLUTION, DRIVER: Add print_evolution().
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2019-01-30 14:45:07 -02:00
d32f7bb21a
REFINEMENTS, DRIVER: Add print_refinement().
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2019-01-30 12:47:15 -02:00
838ec1e465
BOUNDARIES, DRIVER: Add print_boundaries().
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2019-01-30 12:29:48 -02:00
cf3fbf6902
DRIVER, SOURCES, EQUATIONS: Add print_sources().
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Also add magnetized flag in EQUATIONS to indicate if the equations
system is magnetized. This helps to reduce printing some unnecessary
info.
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2019-01-30 12:20:18 -02:00
e7d5d00da8
DRIVER, IO: Move precise_snapshot variable to IO module.
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Also improve a bit print_io().
Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2019-01-30 12:06:26 -02:00
6c23e9af19
DRIVER: Reorganize the initialization/finalization of modules.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2019-01-29 18:13:24 -02:00
feb14685bc
DRIVER: Initialize refinement after domains.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2019-01-29 17:49:40 -02:00
09f032faba
DOMAINS, DRIVER: Initialize and finalize domains module.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2019-01-29 17:46:57 -02:00
ea993ed8d0
BLOCKS, DRIVER: Initialize block dimensions in initialize_blocks().
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2019-01-29 17:26:24 -02:00
b5d177bc72
COORDINATES, DRIVER: Separate coordinate info from initialization.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2019-01-29 17:02:50 -02:00
2ecdf030d6
DRIVER, EQUATIONS: Separate equation info from initialization.
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Signed-off-by: Grzegorz Kowal <grzegorz@amuncode.org>
2019-01-29 15:54:02 -02:00